Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
GDF9O60383 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.49■□□□□ 0.39
GDF9O60383 MIR4745-201ENST00000577608 62 ntBASIC17.49■□□□□ 0.39
GDF9O60383 MIR4751-201ENST00000578027 74 ntBASIC17.49■□□□□ 0.39
GDF9O60383 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.49■□□□□ 0.39
GDF9O60383 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.49■□□□□ 0.39
GDF9O60383 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GDF9O60383 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.49■□□□□ 0.39
GDF9O60383 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GDF9O60383 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.49■□□□□ 0.39
GDF9O60383 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
GDF9O60383 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GDF9O60383 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.49■□□□□ 0.39
GDF9O60383 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GDF9O60383 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF9O60383 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF9O60383 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF9O60383 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF9O60383 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GDF9O60383 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GDF9O60383 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF9O60383 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
GDF9O60383 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GDF9O60383 AL161938.1-201ENST00000569833 2180 ntBASIC17.48■□□□□ 0.39
GDF9O60383 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF9O60383 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF9O60383 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GDF9O60383 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.48■□□□□ 0.39
GDF9O60383 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.48■□□□□ 0.39
GDF9O60383 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.48■□□□□ 0.39
GDF9O60383 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.48■□□□□ 0.39
GDF9O60383 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GDF9O60383 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF9O60383 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF9O60383 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF9O60383 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GDF9O60383 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GDF9O60383 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF9O60383 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.47■□□□□ 0.39
GDF9O60383 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.47■□□□□ 0.39
GDF9O60383 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GDF9O60383 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GDF9O60383 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF9O60383 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF9O60383 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.47■□□□□ 0.39
GDF9O60383 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF9O60383 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF9O60383 AC005034.1-201ENST00000426657 489 ntBASIC17.47■□□□□ 0.39
GDF9O60383 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.47■□□□□ 0.39
GDF9O60383 VN2R19P-201ENST00000442399 1052 ntBASIC17.47■□□□□ 0.39
GDF9O60383 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.47■□□□□ 0.39
GDF9O60383 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.47■□□□□ 0.39
GDF9O60383 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.47■□□□□ 0.39
GDF9O60383 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.47■□□□□ 0.39
GDF9O60383 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.47■□□□□ 0.39
GDF9O60383 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.47■□□□□ 0.39
GDF9O60383 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
GDF9O60383 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.47■□□□□ 0.39
GDF9O60383 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.47■□□□□ 0.39
GDF9O60383 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.47■□□□□ 0.39
GDF9O60383 AL035252.4-201ENST00000624174 288 ntBASIC17.47■□□□□ 0.39
GDF9O60383 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF9O60383 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.47■□□□□ 0.39
GDF9O60383 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GDF9O60383 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF9O60383 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GDF9O60383 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
GDF9O60383 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF9O60383 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.47■□□□□ 0.39
GDF9O60383 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.47■□□□□ 0.39
GDF9O60383 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GDF9O60383 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.47■□□□□ 0.39
GDF9O60383 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.46■□□□□ 0.39
GDF9O60383 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.46■□□□□ 0.39
GDF9O60383 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
GDF9O60383 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GDF9O60383 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
GDF9O60383 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.46■□□□□ 0.39
GDF9O60383 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 HCG4B-203ENST00000450128 991 ntBASIC17.46■□□□□ 0.39
GDF9O60383 AC108073.2-201ENST00000464002 357 ntBASIC17.46■□□□□ 0.39
GDF9O60383 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.46■□□□□ 0.39
GDF9O60383 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GDF9O60383 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
GDF9O60383 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.46■□□□□ 0.39
GDF9O60383 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.46■□□□□ 0.39
GDF9O60383 AC005498.2-205ENST00000593218 784 ntBASIC17.46■□□□□ 0.39
GDF9O60383 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.46■□□□□ 0.39
GDF9O60383 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GDF9O60383 SDHAP2-201ENST00000455183 2001 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms