Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.02■□□□□ 0.32
URB1O60287 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.02■□□□□ 0.32
URB1O60287 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.02■□□□□ 0.32
URB1O60287 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
URB1O60287 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.02■□□□□ 0.32
URB1O60287 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
URB1O60287 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
URB1O60287 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
URB1O60287 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.02■□□□□ 0.32
URB1O60287 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
URB1O60287 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.02■□□□□ 0.32
URB1O60287 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
URB1O60287 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
URB1O60287 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.02■□□□□ 0.32
URB1O60287 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
URB1O60287 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
URB1O60287 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
URB1O60287 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.02■□□□□ 0.32
URB1O60287 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
URB1O60287 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.02■□□□□ 0.31
URB1O60287 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
URB1O60287 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
URB1O60287 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.02■□□□□ 0.31
URB1O60287 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
URB1O60287 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.01■□□□□ 0.31
URB1O60287 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.01■□□□□ 0.31
URB1O60287 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
URB1O60287 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.01■□□□□ 0.31
URB1O60287 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
URB1O60287 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.01■□□□□ 0.31
URB1O60287 AC097374.2-201ENST00000618617 1306 ntBASIC17.01■□□□□ 0.31
URB1O60287 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.01■□□□□ 0.31
URB1O60287 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.01■□□□□ 0.31
URB1O60287 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.01■□□□□ 0.31
URB1O60287 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
URB1O60287 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.01■□□□□ 0.31
URB1O60287 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.01■□□□□ 0.31
URB1O60287 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.01■□□□□ 0.31
URB1O60287 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.01■□□□□ 0.31
URB1O60287 AC107918.4-202ENST00000641623 219 ntBASIC17.01■□□□□ 0.31
URB1O60287 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.01■□□□□ 0.31
URB1O60287 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.01■□□□□ 0.31
URB1O60287 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.01■□□□□ 0.31
URB1O60287 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.01■□□□□ 0.31
URB1O60287 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
URB1O60287 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
URB1O60287 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17■□□□□ 0.31
URB1O60287 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17■□□□□ 0.31
URB1O60287 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17■□□□□ 0.31
URB1O60287 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17■□□□□ 0.31
URB1O60287 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17■□□□□ 0.31
URB1O60287 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17■□□□□ 0.31
URB1O60287 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
URB1O60287 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
URB1O60287 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
URB1O60287 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17■□□□□ 0.31
URB1O60287 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
URB1O60287 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
URB1O60287 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17■□□□□ 0.31
URB1O60287 KRT8P32-201ENST00000512863 1461 ntBASIC17■□□□□ 0.31
URB1O60287 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
URB1O60287 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
URB1O60287 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17■□□□□ 0.31
URB1O60287 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17■□□□□ 0.31
URB1O60287 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
URB1O60287 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17■□□□□ 0.31
URB1O60287 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17■□□□□ 0.31
URB1O60287 AC106028.4-201ENST00000614509 607 ntBASIC17■□□□□ 0.31
URB1O60287 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
URB1O60287 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
URB1O60287 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.99■□□□□ 0.31
URB1O60287 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.99■□□□□ 0.31
URB1O60287 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.99■□□□□ 0.31
URB1O60287 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
URB1O60287 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.99■□□□□ 0.31
URB1O60287 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.99■□□□□ 0.31
URB1O60287 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.99■□□□□ 0.31
URB1O60287 ALG1L5P-201ENST00000482043 771 ntBASIC16.99■□□□□ 0.31
URB1O60287 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms