Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TO15178 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TO15178 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TO15178 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TO15178 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TO15178 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
TO15178 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TO15178 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TO15178 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TO15178 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TO15178 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TO15178 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TO15178 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TO15178 TSSC2-201ENST00000450217 709 ntBASIC16.6■□□□□ 0.25
TO15178 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.6■□□□□ 0.25
TO15178 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TO15178 AL592071.1-201ENST00000611956 408 ntBASIC16.6■□□□□ 0.25
TO15178 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.6■□□□□ 0.25
TO15178 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.6■□□□□ 0.25
TO15178 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TO15178 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.6■□□□□ 0.25
TO15178 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.6■□□□□ 0.25
TO15178 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TO15178 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TO15178 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TO15178 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.6■□□□□ 0.25
TO15178 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TO15178 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TO15178 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TO15178 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TO15178 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.6■□□□□ 0.25
TO15178 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TO15178 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.6■□□□□ 0.25
TO15178 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.59■□□□□ 0.25
TO15178 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
TO15178 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.59■□□□□ 0.25
TO15178 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.59■□□□□ 0.25
TO15178 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.59■□□□□ 0.25
TO15178 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.59■□□□□ 0.25
TO15178 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 MTCL1P1-201ENST00000446207 792 ntBASIC16.59■□□□□ 0.25
TO15178 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TO15178 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.59■□□□□ 0.25
TO15178 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 AC069148.1-201ENST00000608741 768 ntBASIC16.59■□□□□ 0.25
TO15178 IGHV3-41-201ENST00000613121 348 ntBASIC16.59■□□□□ 0.25
TO15178 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.59■□□□□ 0.25
TO15178 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.59■□□□□ 0.25
TO15178 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TO15178 KRT18P55-202ENST00000578578 1546 ntBASIC16.59■□□□□ 0.25
TO15178 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.59■□□□□ 0.25
TO15178 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TO15178 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.59■□□□□ 0.25
TO15178 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TO15178 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.59■□□□□ 0.25
TO15178 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TO15178 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TO15178 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TO15178 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TO15178 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TO15178 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.58■□□□□ 0.25
TO15178 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TO15178 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TO15178 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TO15178 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.58■□□□□ 0.24
TO15178 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TO15178 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TO15178 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TO15178 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.58■□□□□ 0.24
TO15178 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TO15178 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TO15178 AC112698.1-201ENST00000510299 916 ntBASIC16.58■□□□□ 0.24
TO15178 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.58■□□□□ 0.24
TO15178 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.58■□□□□ 0.24
TO15178 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TO15178 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TO15178 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TO15178 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.58■□□□□ 0.24
TO15178 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.58■□□□□ 0.24
TO15178 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TO15178 AC020916.1-201ENST00000587762 1774 ntBASIC16.58■□□□□ 0.24
TO15178 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TO15178 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
TO15178 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.58■□□□□ 0.24
TO15178 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms