Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SEMA3EO15041 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
SEMA3EO15041 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SEMA3EO15041 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SEMA3EO15041 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SEMA3EO15041 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SEMA3EO15041 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SEMA3EO15041 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
SEMA3EO15041 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SEMA3EO15041 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.63■■□□□ 1.05
SEMA3EO15041 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEMA3EO15041 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEMA3EO15041 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEMA3EO15041 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEMA3EO15041 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SEMA3EO15041 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEMA3EO15041 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
SEMA3EO15041 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEMA3EO15041 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.63■■□□□ 1.05
SEMA3EO15041 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEMA3EO15041 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEMA3EO15041 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SEMA3EO15041 RNPS1P1-201ENST00000507437 918 ntBASIC21.63■■□□□ 1.05
SEMA3EO15041 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SEMA3EO15041 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.63■■□□□ 1.05
SEMA3EO15041 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.63■■□□□ 1.05
SEMA3EO15041 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.63■■□□□ 1.05
SEMA3EO15041 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.63■■□□□ 1.05
SEMA3EO15041 BX640515.1-201ENST00000617215 977 ntBASIC21.63■■□□□ 1.05
SEMA3EO15041 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.63■■□□□ 1.05
SEMA3EO15041 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.63■■□□□ 1.05
SEMA3EO15041 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEMA3EO15041 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.63■■□□□ 1.05
SEMA3EO15041 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEMA3EO15041 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SEMA3EO15041 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.63■■□□□ 1.05
SEMA3EO15041 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEMA3EO15041 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEMA3EO15041 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SEMA3EO15041 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SEMA3EO15041 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.62■■□□□ 1.05
SEMA3EO15041 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.62■■□□□ 1.05
SEMA3EO15041 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.62■■□□□ 1.05
SEMA3EO15041 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SEMA3EO15041 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SEMA3EO15041 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SEMA3EO15041 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SEMA3EO15041 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.62■■□□□ 1.05
SEMA3EO15041 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.62■■□□□ 1.05
SEMA3EO15041 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SEMA3EO15041 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.62■■□□□ 1.05
SEMA3EO15041 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SEMA3EO15041 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.62■■□□□ 1.05
SEMA3EO15041 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.62■■□□□ 1.05
SEMA3EO15041 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.62■■□□□ 1.05
SEMA3EO15041 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.62■■□□□ 1.05
SEMA3EO15041 AL139288.1-201ENST00000623748 933 ntBASIC21.62■■□□□ 1.05
SEMA3EO15041 AC148477.8-201ENST00000624298 468 ntBASIC21.62■■□□□ 1.05
SEMA3EO15041 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.62■■□□□ 1.05
SEMA3EO15041 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SEMA3EO15041 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SEMA3EO15041 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.62■■□□□ 1.05
SEMA3EO15041 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
SEMA3EO15041 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SEMA3EO15041 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SEMA3EO15041 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SEMA3EO15041 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SEMA3EO15041 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
SEMA3EO15041 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SEMA3EO15041 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SEMA3EO15041 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SEMA3EO15041 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SEMA3EO15041 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.61■■□□□ 1.05
SEMA3EO15041 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SEMA3EO15041 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SEMA3EO15041 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.61■■□□□ 1.05
SEMA3EO15041 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.61■■□□□ 1.05
SEMA3EO15041 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.61■■□□□ 1.05
SEMA3EO15041 COX5BP2-201ENST00000392354 334 ntBASIC21.61■■□□□ 1.05
SEMA3EO15041 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SEMA3EO15041 AP000347.1-202ENST00000435868 847 ntBASIC21.61■■□□□ 1.05
SEMA3EO15041 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.61■■□□□ 1.05
SEMA3EO15041 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.61■■□□□ 1.05
SEMA3EO15041 AC079776.4-201ENST00000511039 504 ntBASIC21.61■■□□□ 1.05
SEMA3EO15041 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SEMA3EO15041 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SEMA3EO15041 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.61■■□□□ 1.05
SEMA3EO15041 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SEMA3EO15041 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.61■■□□□ 1.05
SEMA3EO15041 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.61■■□□□ 1.05
SEMA3EO15041 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
SEMA3EO15041 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.61■■□□□ 1.05
SEMA3EO15041 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.61■■□□□ 1.05
SEMA3EO15041 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SEMA3EO15041 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.61■■□□□ 1.05
SEMA3EO15041 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.61■■□□□ 1.05
SEMA3EO15041 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SEMA3EO15041 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.61■■□□□ 1.05
SEMA3EO15041 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SEMA3EO15041 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms