Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 AC084018.2-201ENST00000613093 2607 ntBASIC16.7■□□□□ 0.26
TNFRSF11BO00300 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 AP001094.4-201ENST00000579008 2176 ntBASIC16.7■□□□□ 0.26
TNFRSF11BO00300 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.7■□□□□ 0.26
TNFRSF11BO00300 KRT18P23-201ENST00000435622 1283 ntBASIC16.7■□□□□ 0.26
TNFRSF11BO00300 CA15P1-201ENST00000481698 905 ntBASIC16.7■□□□□ 0.26
TNFRSF11BO00300 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 CROCCP1-201ENST00000426910 5675 ntBASIC16.7■□□□□ 0.26
TNFRSF11BO00300 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TNFRSF11BO00300 HOXB1-202ENST00000577092 1414 ntBASIC16.7■□□□□ 0.26
TNFRSF11BO00300 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 FAM197Y1-201ENST00000421178 764 ntBASIC16.69■□□□□ 0.26
TNFRSF11BO00300 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 MIR4674-201ENST00000582457 87 ntBASIC16.69■□□□□ 0.26
TNFRSF11BO00300 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 DGCR10-201ENST00000609839 495 ntBASIC16.69■□□□□ 0.26
TNFRSF11BO00300 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF11BO00300 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 LINC00602-201ENST00000629776 2065 ntBASIC16.68■□□□□ 0.26
TNFRSF11BO00300 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 AC128676.1-201ENST00000454392 318 ntBASIC16.68■□□□□ 0.26
TNFRSF11BO00300 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFRSF11BO00300 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms