Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.67■□□□□ 0.42
TAF4O00268 AC010327.4-202ENST00000591484 748 ntBASIC17.67■□□□□ 0.42
TAF4O00268 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.67■□□□□ 0.42
TAF4O00268 MIR7706-201ENST00000613747 67 ntBASIC17.67■□□□□ 0.42
TAF4O00268 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
TAF4O00268 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TAF4O00268 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.67■□□□□ 0.42
TAF4O00268 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.67■□□□□ 0.42
TAF4O00268 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 NSUN5P1-202ENST00000421140 1535 ntBASIC17.67■□□□□ 0.42
TAF4O00268 NSUN5P2-203ENST00000457352 1529 ntBASIC17.67■□□□□ 0.42
TAF4O00268 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.66■□□□□ 0.42
TAF4O00268 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TAF4O00268 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.66■□□□□ 0.42
TAF4O00268 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TAF4O00268 AC009113.1-201ENST00000570267 2443 ntBASIC17.66■□□□□ 0.42
TAF4O00268 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TAF4O00268 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.66■□□□□ 0.42
TAF4O00268 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.66■□□□□ 0.42
TAF4O00268 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 HLA-J-203ENST00000494367 1087 ntBASIC17.66■□□□□ 0.42
TAF4O00268 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.66■□□□□ 0.42
TAF4O00268 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.66■□□□□ 0.42
TAF4O00268 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.66■□□□□ 0.42
TAF4O00268 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.66■□□□□ 0.42
TAF4O00268 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.66■□□□□ 0.42
TAF4O00268 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.66■□□□□ 0.42
TAF4O00268 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.66■□□□□ 0.42
TAF4O00268 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TAF4O00268 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TAF4O00268 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TAF4O00268 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
TAF4O00268 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
TAF4O00268 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TAF4O00268 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TAF4O00268 AC018470.1-201ENST00000624790 3129 ntBASIC17.65■□□□□ 0.42
TAF4O00268 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TAF4O00268 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TAF4O00268 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TAF4O00268 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TAF4O00268 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.65■□□□□ 0.42
TAF4O00268 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TAF4O00268 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TAF4O00268 AC018712.1-201ENST00000455767 687 ntBASIC17.65■□□□□ 0.42
TAF4O00268 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.65■□□□□ 0.42
TAF4O00268 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.65■□□□□ 0.42
TAF4O00268 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.65■□□□□ 0.42
TAF4O00268 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.65■□□□□ 0.42
TAF4O00268 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.65■□□□□ 0.42
TAF4O00268 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.65■□□□□ 0.42
TAF4O00268 AP005901.3-202ENST00000581653 237 ntBASIC17.65■□□□□ 0.42
TAF4O00268 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
TAF4O00268 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TAF4O00268 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TAF4O00268 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.65■□□□□ 0.42
TAF4O00268 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.65■□□□□ 0.42
TAF4O00268 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TAF4O00268 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TAF4O00268 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
TAF4O00268 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TAF4O00268 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TAF4O00268 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TAF4O00268 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TAF4O00268 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TAF4O00268 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.65■□□□□ 0.42
TAF4O00268 NOC2LP2-201ENST00000407594 1944 ntBASIC17.64■□□□□ 0.42
TAF4O00268 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
TAF4O00268 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
TAF4O00268 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TAF4O00268 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
TAF4O00268 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TAF4O00268 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TAF4O00268 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TAF4O00268 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TAF4O00268 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TAF4O00268 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.64■□□□□ 0.41
TAF4O00268 AC112482.1-201ENST00000492080 688 ntBASIC17.64■□□□□ 0.41
TAF4O00268 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms