Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.21□□□□□ -0.29
SMKR1H3BMG3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMKR1H3BMG3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMKR1H3BMG3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.21□□□□□ -0.29
SMKR1H3BMG3 AC008687.6-201ENST00000596318 630 ntBASIC13.21□□□□□ -0.29
SMKR1H3BMG3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.21□□□□□ -0.29
SMKR1H3BMG3 HLA-B-256ENST00000639848 1089 ntBASIC13.21□□□□□ -0.29
SMKR1H3BMG3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMKR1H3BMG3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.21□□□□□ -0.29
SMKR1H3BMG3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMKR1H3BMG3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMKR1H3BMG3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMKR1H3BMG3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
SMKR1H3BMG3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SMKR1H3BMG3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SMKR1H3BMG3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.21□□□□□ -0.3
SMKR1H3BMG3 PCDHB19P-201ENST00000570871 2371 ntBASIC13.21□□□□□ -0.3
SMKR1H3BMG3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SMKR1H3BMG3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.21□□□□□ -0.3
SMKR1H3BMG3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
SMKR1H3BMG3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SMKR1H3BMG3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SMKR1H3BMG3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 KRT18P55-202ENST00000578578 1546 ntBASIC13.19□□□□□ -0.3
SMKR1H3BMG3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 NBPF21P-201ENST00000425093 1451 ntBASIC13.19□□□□□ -0.3
SMKR1H3BMG3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 MIR663A-201ENST00000385250 93 ntBASIC13.19□□□□□ -0.3
SMKR1H3BMG3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMKR1H3BMG3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms