Protein–RNA interactions for Protein: A7E2V4

ZSWIM8, Zinc finger SWIM domain-containing protein 8, humanhuman

Predictions only

Length 1,837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8A7E2V4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.33■□□□□ 0.85
ZSWIM8A7E2V4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZSWIM8A7E2V4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZSWIM8A7E2V4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZSWIM8A7E2V4 PDPK2P-202ENST00000562415 1191 ntBASIC20.33■□□□□ 0.85
ZSWIM8A7E2V4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZSWIM8A7E2V4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.33■□□□□ 0.85
ZSWIM8A7E2V4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZSWIM8A7E2V4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
ZSWIM8A7E2V4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZSWIM8A7E2V4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZSWIM8A7E2V4 AC132938.6-201ENST00000623828 1655 ntBASIC20.33■□□□□ 0.84
ZSWIM8A7E2V4 SLC25A24-204ENST00000569674 2357 ntBASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 NCF1C-201ENST00000438382 1427 ntBASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.32■□□□□ 0.84
ZSWIM8A7E2V4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 SPDYE21P-201ENST00000413323 827 ntBASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 ADH5P3-201ENST00000433842 1137 ntBASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.31■□□□□ 0.84
ZSWIM8A7E2V4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 AC109322.1-201ENST00000524499 1264 ntBASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 AC010654.1-201ENST00000615722 808 ntBASIC20.3■□□□□ 0.84
ZSWIM8A7E2V4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZSWIM8A7E2V4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZSWIM8A7E2V4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ZSWIM8A7E2V4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.29■□□□□ 0.84
ZSWIM8A7E2V4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZSWIM8A7E2V4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.29■□□□□ 0.84
ZSWIM8A7E2V4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZSWIM8A7E2V4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.29■□□□□ 0.84
ZSWIM8A7E2V4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZSWIM8A7E2V4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.29■□□□□ 0.84
ZSWIM8A7E2V4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZSWIM8A7E2V4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.29■□□□□ 0.84
ZSWIM8A7E2V4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZSWIM8A7E2V4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms