Protein–RNA interactions for Protein: A6NNM3

RIMBP3B, RIMS-binding protein 3B, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3BA6NNM3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RIMBP3BA6NNM3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RIMBP3BA6NNM3 PTCHD3P3-201ENST00000403073 906 ntBASIC28.37■■■□□ 2.13
RIMBP3BA6NNM3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC28.37■■■□□ 2.13
RIMBP3BA6NNM3 AC096633.1-201ENST00000422446 749 ntBASIC28.37■■■□□ 2.13
RIMBP3BA6NNM3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC28.37■■■□□ 2.13
RIMBP3BA6NNM3 AL135744.1-201ENST00000565098 629 ntBASIC28.37■■■□□ 2.13
RIMBP3BA6NNM3 AC004233.3-201ENST00000607794 1269 ntBASIC28.37■■■□□ 2.13
RIMBP3BA6NNM3 AL512408.1-201ENST00000569378 2000 ntBASIC28.37■■■□□ 2.13
RIMBP3BA6NNM3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
RIMBP3BA6NNM3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
RIMBP3BA6NNM3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RIMBP3BA6NNM3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
RIMBP3BA6NNM3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 SDHAP2-201ENST00000455183 2001 ntBASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 BCYRN1-201ENST00000418539 200 ntBASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 TSSK5P-201ENST00000423978 907 ntBASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 AC026150.2-201ENST00000564693 1156 ntBASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RIMBP3BA6NNM3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
RIMBP3BA6NNM3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
RIMBP3BA6NNM3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
RIMBP3BA6NNM3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RIMBP3BA6NNM3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC28.35■■■□□ 2.13
RIMBP3BA6NNM3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC28.35■■■□□ 2.13
RIMBP3BA6NNM3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC28.35■■■□□ 2.13
RIMBP3BA6NNM3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC28.35■■■□□ 2.13
RIMBP3BA6NNM3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC28.35■■■□□ 2.13
RIMBP3BA6NNM3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RIMBP3BA6NNM3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC28.35■■■□□ 2.13
RIMBP3BA6NNM3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC28.35■■■□□ 2.13
RIMBP3BA6NNM3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 AC241585.1-201ENST00000433527 519 ntBASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 AC119751.2-201ENST00000504529 210 ntBASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 NFYC-AS1-201ENST00000606277 1687 ntBASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
RIMBP3BA6NNM3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC28.33■■■□□ 2.13
RIMBP3BA6NNM3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RIMBP3BA6NNM3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RIMBP3BA6NNM3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
RIMBP3BA6NNM3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
RIMBP3BA6NNM3 AC002056.1-201ENST00000395613 760 ntBASIC28.33■■■□□ 2.13
RIMBP3BA6NNM3 AC112492.5-201ENST00000421897 457 ntBASIC28.33■■■□□ 2.13
RIMBP3BA6NNM3 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC28.33■■■□□ 2.13
RIMBP3BA6NNM3 FAM8A2P-201ENST00000528813 1142 ntBASIC28.33■■■□□ 2.13
RIMBP3BA6NNM3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RIMBP3BA6NNM3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC28.33■■■□□ 2.13
RIMBP3BA6NNM3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RIMBP3BA6NNM3 IRX1P1-201ENST00000438849 1838 ntBASIC28.33■■■□□ 2.13
RIMBP3BA6NNM3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
RIMBP3BA6NNM3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RIMBP3BA6NNM3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
RIMBP3BA6NNM3 FAM86C2P-203ENST00000528684 1004 ntBASIC28.32■■■□□ 2.12
RIMBP3BA6NNM3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
RIMBP3BA6NNM3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
RIMBP3BA6NNM3 AC243562.1-201ENST00000560672 389 ntBASIC28.32■■■□□ 2.12
RIMBP3BA6NNM3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
RIMBP3BA6NNM3 AC132938.5-201ENST00000624980 1813 ntBASIC28.32■■■□□ 2.12
RIMBP3BA6NNM3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC28.32■■■□□ 2.12
RIMBP3BA6NNM3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
RIMBP3BA6NNM3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC28.32■■■□□ 2.12
RIMBP3BA6NNM3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
RIMBP3BA6NNM3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC28.32■■■□□ 2.12
RIMBP3BA6NNM3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RIMBP3BA6NNM3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC28.32■■■□□ 2.12
RIMBP3BA6NNM3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RIMBP3BA6NNM3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC28.32■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms