Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM235A6NFC5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 AC011506.1-201ENST00000474329 610 ntBASIC15.43■□□□□ 0.06
TMEM235A6NFC5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM235A6NFC5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 CROCCP1-201ENST00000426910 5675 ntBASIC15.42■□□□□ 0.06
TMEM235A6NFC5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TMEM235A6NFC5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 B3GAT3P1-201ENST00000471720 806 ntBASIC15.41■□□□□ 0.06
TMEM235A6NFC5 MIR6786-201ENST00000616843 113 ntBASIC15.41■□□□□ 0.06
TMEM235A6NFC5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM235A6NFC5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms