Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TBC1D3BA6NDS4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.27■□□□□ 0.51
TBC1D3BA6NDS4 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.27■□□□□ 0.51
TBC1D3BA6NDS4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TBC1D3BA6NDS4 AL031598.1-201ENST00000561511 1773 ntBASIC18.27■□□□□ 0.51
TBC1D3BA6NDS4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TBC1D3BA6NDS4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TBC1D3BA6NDS4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 HTR7P1-202ENST00000624664 4411 ntBASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 AC139887.3-201ENST00000568585 713 ntBASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TBC1D3BA6NDS4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 AC132938.6-201ENST00000623828 1655 ntBASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 MIR574-201ENST00000385209 96 ntBASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 PMS2P1-201ENST00000431037 1228 ntBASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 HNRNPDP1-201ENST00000439535 754 ntBASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 SLC25A1P1-201ENST00000528351 927 ntBASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 AL049840.3-201ENST00000602669 611 ntBASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 GPALPP1-207ENST00000611650 899 ntBASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 FAM215A-202ENST00000632077 792 ntBASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 AC243591.1-201ENST00000452967 1364 ntBASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TBC1D3BA6NDS4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TBC1D3BA6NDS4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms