Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LRCOL1A6NCL2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC12.1□□□□□ -0.47
LRCOL1A6NCL2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LRCOL1A6NCL2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LRCOL1A6NCL2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LRCOL1A6NCL2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
LRCOL1A6NCL2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LRCOL1A6NCL2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LRCOL1A6NCL2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LRCOL1A6NCL2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LRCOL1A6NCL2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.1□□□□□ -0.47
LRCOL1A6NCL2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LRCOL1A6NCL2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.1□□□□□ -0.47
LRCOL1A6NCL2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 MYLKP1-201ENST00000509077 1580 ntBASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 IGHGP-201ENST00000390555 1178 ntBASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 DUSP5P1-201ENST00000441325 1139 ntBASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 AP002414.4-201ENST00000589764 1148 ntBASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 CLEC4GP1-201ENST00000596555 870 ntBASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 GPR32P1-201ENST00000601788 811 ntBASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
LRCOL1A6NCL2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LRCOL1A6NCL2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
LRCOL1A6NCL2 AC009102.3-201ENST00000623118 1491 ntBASIC12.08□□□□□ -0.47
LRCOL1A6NCL2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LRCOL1A6NCL2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 KRT126P-201ENST00000549467 1181 ntBASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC12.08□□□□□ -0.48
LRCOL1A6NCL2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LRCOL1A6NCL2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LRCOL1A6NCL2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms