Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ABCD1P5-201ENST00000445663 754 ntBASIC26.56■■□□□ 1.84
HFM1A2PYH4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
HFM1A2PYH4 AC019129.2-201ENST00000609837 1235 ntBASIC26.56■■□□□ 1.84
HFM1A2PYH4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
HFM1A2PYH4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC26.56■■□□□ 1.84
HFM1A2PYH4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC26.56■■□□□ 1.84
HFM1A2PYH4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC26.56■■□□□ 1.84
HFM1A2PYH4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
HFM1A2PYH4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
HFM1A2PYH4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
HFM1A2PYH4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
HFM1A2PYH4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC26.56■■□□□ 1.84
HFM1A2PYH4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
HFM1A2PYH4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
HFM1A2PYH4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
HFM1A2PYH4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC26.56■■□□□ 1.84
HFM1A2PYH4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
HFM1A2PYH4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
HFM1A2PYH4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
HFM1A2PYH4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
HFM1A2PYH4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC26.56■■□□□ 1.84
HFM1A2PYH4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
HFM1A2PYH4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC26.56■■□□□ 1.84
HFM1A2PYH4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC26.56■■□□□ 1.84
HFM1A2PYH4 AP000347.1-202ENST00000435868 847 ntBASIC26.56■■□□□ 1.84
HFM1A2PYH4 AC132008.2-207ENST00000454517 770 ntBASIC26.56■■□□□ 1.84
HFM1A2PYH4 AC018712.1-201ENST00000455767 687 ntBASIC26.56■■□□□ 1.84
HFM1A2PYH4 RNA5SP419-201ENST00000515908 135 ntBASIC26.56■■□□□ 1.84
HFM1A2PYH4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
HFM1A2PYH4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC26.56■■□□□ 1.84
HFM1A2PYH4 AD001527.2-201ENST00000622994 785 ntBASIC26.56■■□□□ 1.84
HFM1A2PYH4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
HFM1A2PYH4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC26.55■■□□□ 1.84
HFM1A2PYH4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC26.55■■□□□ 1.84
HFM1A2PYH4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HFM1A2PYH4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HFM1A2PYH4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC26.55■■□□□ 1.84
HFM1A2PYH4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
HFM1A2PYH4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
HFM1A2PYH4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HFM1A2PYH4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HFM1A2PYH4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC26.55■■□□□ 1.84
HFM1A2PYH4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
HFM1A2PYH4 LINC01711-201ENST00000598340 967 ntBASIC26.55■■□□□ 1.84
HFM1A2PYH4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC26.55■■□□□ 1.84
HFM1A2PYH4 AP000867.4-201ENST00000641616 219 ntBASIC26.55■■□□□ 1.84
HFM1A2PYH4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HFM1A2PYH4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC26.55■■□□□ 1.84
HFM1A2PYH4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
HFM1A2PYH4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
HFM1A2PYH4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC26.54■■□□□ 1.84
HFM1A2PYH4 TBC1D3P5-201ENST00000579401 1545 ntBASIC26.54■■□□□ 1.84
HFM1A2PYH4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
HFM1A2PYH4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
HFM1A2PYH4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC26.54■■□□□ 1.84
HFM1A2PYH4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC26.54■■□□□ 1.84
HFM1A2PYH4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
HFM1A2PYH4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
HFM1A2PYH4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC26.54■■□□□ 1.84
HFM1A2PYH4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC26.54■■□□□ 1.84
HFM1A2PYH4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
HFM1A2PYH4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC26.54■■□□□ 1.84
HFM1A2PYH4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC26.54■■□□□ 1.84
HFM1A2PYH4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
HFM1A2PYH4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC26.54■■□□□ 1.84
HFM1A2PYH4 AC073592.4-201ENST00000623827 446 ntBASIC26.54■■□□□ 1.84
HFM1A2PYH4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
HFM1A2PYH4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC26.54■■□□□ 1.84
HFM1A2PYH4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC26.53■■□□□ 1.84
HFM1A2PYH4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC26.53■■□□□ 1.84
HFM1A2PYH4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
HFM1A2PYH4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
HFM1A2PYH4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
HFM1A2PYH4 AP005117.1-201ENST00000584346 1413 ntBASIC26.53■■□□□ 1.84
HFM1A2PYH4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
HFM1A2PYH4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC26.53■■□□□ 1.84
HFM1A2PYH4 COX5BP2-201ENST00000392354 334 ntBASIC26.53■■□□□ 1.84
HFM1A2PYH4 MRPL3P1-201ENST00000400109 1033 ntBASIC26.53■■□□□ 1.84
HFM1A2PYH4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
HFM1A2PYH4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC26.53■■□□□ 1.84
HFM1A2PYH4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC26.53■■□□□ 1.84
HFM1A2PYH4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
HFM1A2PYH4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC26.53■■□□□ 1.84
HFM1A2PYH4 MNT-208ENST00000575394 606 ntTSL 4 BASIC26.53■■□□□ 1.84
HFM1A2PYH4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC26.53■■□□□ 1.84
HFM1A2PYH4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
HFM1A2PYH4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
HFM1A2PYH4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
HFM1A2PYH4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
HFM1A2PYH4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
HFM1A2PYH4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC26.52■■□□□ 1.84
HFM1A2PYH4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC26.52■■□□□ 1.84
HFM1A2PYH4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
HFM1A2PYH4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC26.52■■□□□ 1.84
HFM1A2PYH4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
HFM1A2PYH4 AL353593.2-201ENST00000602529 1483 ntBASIC26.52■■□□□ 1.84
HFM1A2PYH4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC26.52■■□□□ 1.84
HFM1A2PYH4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
HFM1A2PYH4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC26.52■■□□□ 1.84
HFM1A2PYH4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms