Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.13■□□□□ 0.65
CAPN6Q9Y6Q1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN6Q9Y6Q1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN6Q9Y6Q1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CAPN6Q9Y6Q1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 LINC00304-203ENST00000565008 1864 ntBASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 TNRC18P3-201ENST00000441896 2691 ntBASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.12■□□□□ 0.65
CAPN6Q9Y6Q1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 HTR7P1-202ENST00000624664 4411 ntBASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 ABHD17AP1-201ENST00000358206 933 ntBASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CAPN6Q9Y6Q1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 RPS2P55-201ENST00000397318 883 ntBASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 AC107956.1-201ENST00000494359 873 ntBASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 AL353719.1-201ENST00000566847 864 ntBASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 AC112497.1-201ENST00000624824 639 ntBASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CAPN6Q9Y6Q1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms