Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.33■□□□□ 0.68
UBQLN1Q9UMX0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.33■□□□□ 0.68
UBQLN1Q9UMX0 RN7SL510P-201ENST00000581311 263 ntBASIC19.33■□□□□ 0.68
UBQLN1Q9UMX0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.33■□□□□ 0.68
UBQLN1Q9UMX0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
UBQLN1Q9UMX0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.33■□□□□ 0.68
UBQLN1Q9UMX0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.33■□□□□ 0.68
UBQLN1Q9UMX0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBQLN1Q9UMX0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.33■□□□□ 0.68
UBQLN1Q9UMX0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBQLN1Q9UMX0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
UBQLN1Q9UMX0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBQLN1Q9UMX0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBQLN1Q9UMX0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBQLN1Q9UMX0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBQLN1Q9UMX0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 AC004870.1-201ENST00000315132 882 ntBASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 TP73-AS1-210ENST00000637775 1455 ntBASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UBQLN1Q9UMX0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 AC009113.1-201ENST00000570267 2443 ntBASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBQLN1Q9UMX0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBQLN1Q9UMX0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms