Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NOTCH3Q9UM47 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NOTCH3Q9UM47 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
NOTCH3Q9UM47 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.96□□□□□ -0.18
NOTCH3Q9UM47 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.96□□□□□ -0.18
NOTCH3Q9UM47 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NOTCH3Q9UM47 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NOTCH3Q9UM47 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.96□□□□□ -0.18
NOTCH3Q9UM47 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NOTCH3Q9UM47 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.96□□□□□ -0.18
NOTCH3Q9UM47 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NOTCH3Q9UM47 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.96□□□□□ -0.18
NOTCH3Q9UM47 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.96□□□□□ -0.18
NOTCH3Q9UM47 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.96□□□□□ -0.18
NOTCH3Q9UM47 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.18
NOTCH3Q9UM47 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NOTCH3Q9UM47 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 TREX1-205ENST00000625293 1783 ntBASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 AC106820.2-201ENST00000563775 3264 ntBASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 KRT89P-201ENST00000620027 1478 ntBASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 MIR1233-2-201ENST00000408138 82 ntBASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 MIR1233-1-201ENST00000408722 82 ntBASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 KRT18P41-201ENST00000518924 1277 ntBASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.95□□□□□ -0.18
NOTCH3Q9UM47 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 PGAM5P1-201ENST00000518923 814 ntBASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 MIR3180-4-201ENST00000582223 153 ntBASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 AL591684.3-201ENST00000605187 298 ntBASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NOTCH3Q9UM47 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 AC018712.1-201ENST00000455767 687 ntBASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 AC104390.1-201ENST00000555663 520 ntBASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 AC009065.1-201ENST00000564055 1225 ntBASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 AC124864.1-201ENST00000623408 392 ntBASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.93□□□□□ -0.18
NOTCH3Q9UM47 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms