Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DNMT3BQ9UBC3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 AC092865.5-201ENST00000545435 363 ntBASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DNMT3BQ9UBC3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 IGHV3-22-201ENST00000520721 359 ntBASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DNMT3BQ9UBC3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
DNMT3BQ9UBC3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
DNMT3BQ9UBC3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
DNMT3BQ9UBC3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 OR7E14P-202ENST00000530490 1290 ntBASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 AC012640.2-201ENST00000561606 901 ntBASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 AC025062.2-201ENST00000605477 670 ntBASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
DNMT3BQ9UBC3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 AC145285.3-201ENST00000564603 959 ntBASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 NKAPP1-205ENST00000585790 367 ntBASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 GMCL1P1-201ENST00000463439 1581 ntBASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 AC132938.6-201ENST00000623828 1655 ntBASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DNMT3BQ9UBC3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms