Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 AL645929.1-201ENST00000420084 975 ntBASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 AL162741.1-201ENST00000565563 1558 ntBASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PARPBPQ9NWS1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 AL024508.2-201ENST00000607749 1894 ntBASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 AC091076.1-201ENST00000610741 619 ntBASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PARPBPQ9NWS1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 ESPNP-201ENST00000270691 2015 ntBASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms