Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 AP001636.2-201ENST00000525517 696 ntBASIC20.92■□□□□ 0.94
RNF216Q9NWF9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF216Q9NWF9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 AL358176.4-201ENST00000428891 675 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 MYC-208ENST00000641036 567 ntBASIC20.91■□□□□ 0.94
RNF216Q9NWF9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF216Q9NWF9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 AL032819.2-201ENST00000624543 2162 ntBASIC20.9■□□□□ 0.94
RNF216Q9NWF9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 MTND3P20-201ENST00000407663 186 ntBASIC20.9■□□□□ 0.94
RNF216Q9NWF9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 AC027176.2-201ENST00000559166 746 ntBASIC20.9■□□□□ 0.94
RNF216Q9NWF9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 AC005082.1-201ENST00000413042 2259 ntBASIC20.9■□□□□ 0.94
RNF216Q9NWF9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RNF216Q9NWF9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
RNF216Q9NWF9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.89■□□□□ 0.94
RNF216Q9NWF9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.89■□□□□ 0.94
RNF216Q9NWF9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF216Q9NWF9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF216Q9NWF9 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RNF216Q9NWF9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.89■□□□□ 0.94
RNF216Q9NWF9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.89■□□□□ 0.94
RNF216Q9NWF9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF216Q9NWF9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RNF216Q9NWF9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF216Q9NWF9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF216Q9NWF9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF216Q9NWF9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF216Q9NWF9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF216Q9NWF9 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF216Q9NWF9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF216Q9NWF9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF216Q9NWF9 AC253576.2-201ENST00000618815 580 ntBASIC20.89■□□□□ 0.93
RNF216Q9NWF9 AL121956.5-201ENST00000625261 221 ntBASIC20.89■□□□□ 0.93
RNF216Q9NWF9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RNF216Q9NWF9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF216Q9NWF9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RNF216Q9NWF9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF216Q9NWF9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF216Q9NWF9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms