Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 AC073648.6-201ENST00000641589 218 ntBASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 MST1L-201ENST00000442552 2185 ntBASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.91■□□□□ 0.78
SPTLC3Q9NUV7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 KRT18P41-201ENST00000518924 1277 ntBASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 KRT18P6-201ENST00000555540 1265 ntBASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.9■□□□□ 0.78
SPTLC3Q9NUV7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SPTLC3Q9NUV7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.89■□□□□ 0.78
SPTLC3Q9NUV7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
SPTLC3Q9NUV7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 GMCL1P1-201ENST00000463439 1581 ntBASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 CR392000.1-201ENST00000624770 1228 ntBASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC3Q9NUV7 AL513477.1-201ENST00000602865 2407 ntBASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 KRT16P1-201ENST00000399124 1418 ntBASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 ID1-201ENST00000376105 1233 ntBASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.88■□□□□ 0.77
SPTLC3Q9NUV7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms