Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 AL121912.1-201ENST00000603683 238 ntBASIC18.63■□□□□ 0.57
VPS45Q9NRW7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 AC007613.1-201ENST00000572811 2597 ntBASIC18.63■□□□□ 0.57
VPS45Q9NRW7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 GMCL1P1-201ENST00000463439 1581 ntBASIC18.63■□□□□ 0.57
VPS45Q9NRW7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VPS45Q9NRW7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 AC104819.1-201ENST00000504587 486 ntBASIC18.62■□□□□ 0.57
VPS45Q9NRW7 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
VPS45Q9NRW7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 ABALON-201ENST00000629058 1903 ntBASIC18.61■□□□□ 0.57
VPS45Q9NRW7 AL354751.1-201ENST00000412768 1863 ntBASIC18.61■□□□□ 0.57
VPS45Q9NRW7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 AC120114.3-201ENST00000611923 658 ntBASIC18.61■□□□□ 0.57
VPS45Q9NRW7 BX640515.1-201ENST00000617215 977 ntBASIC18.61■□□□□ 0.57
VPS45Q9NRW7 AC139530.3-201ENST00000620344 690 ntBASIC18.61■□□□□ 0.57
VPS45Q9NRW7 AL157888.1-201ENST00000631930 593 ntBASIC18.61■□□□□ 0.57
VPS45Q9NRW7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS45Q9NRW7 AC005332.8-201ENST00000622750 2735 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms