Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ARHGEF3Q9NR81 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARHGEF3Q9NR81 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.09■□□□□ 0.65
ARHGEF3Q9NR81 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ARHGEF3Q9NR81 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
ARHGEF3Q9NR81 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.08■□□□□ 0.65
ARHGEF3Q9NR81 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.08■□□□□ 0.65
ARHGEF3Q9NR81 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.65
ARHGEF3Q9NR81 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ARHGEF3Q9NR81 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ARHGEF3Q9NR81 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ARHGEF3Q9NR81 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.08■□□□□ 0.65
ARHGEF3Q9NR81 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.08■□□□□ 0.65
ARHGEF3Q9NR81 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
ARHGEF3Q9NR81 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARHGEF3Q9NR81 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.08■□□□□ 0.64
ARHGEF3Q9NR81 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.08■□□□□ 0.64
ARHGEF3Q9NR81 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.08■□□□□ 0.64
ARHGEF3Q9NR81 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.08■□□□□ 0.64
ARHGEF3Q9NR81 AP001005.1-201ENST00000571755 1248 ntBASIC19.08■□□□□ 0.64
ARHGEF3Q9NR81 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ARHGEF3Q9NR81 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
ARHGEF3Q9NR81 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.08■□□□□ 0.64
ARHGEF3Q9NR81 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARHGEF3Q9NR81 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.08■□□□□ 0.64
ARHGEF3Q9NR81 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARHGEF3Q9NR81 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ARHGEF3Q9NR81 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.08■□□□□ 0.64
ARHGEF3Q9NR81 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.08■□□□□ 0.64
ARHGEF3Q9NR81 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 Z98044.1-201ENST00000632503 1764 ntBASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 MIR574-201ENST00000385209 96 ntBASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 GPR32P1-201ENST00000601788 811 ntBASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 AL592071.1-201ENST00000611956 408 ntBASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 HOXB1-202ENST00000577092 1414 ntBASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARHGEF3Q9NR81 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 IL9RP2-201ENST00000423948 1312 ntBASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 AL109659.2-201ENST00000606809 1674 ntBASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 NUS1P2-201ENST00000417358 873 ntBASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 VENTXP7-201ENST00000475503 772 ntBASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.06■□□□□ 0.64
ARHGEF3Q9NR81 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF3Q9NR81 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF3Q9NR81 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF3Q9NR81 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF3Q9NR81 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF3Q9NR81 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ARHGEF3Q9NR81 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ARHGEF3Q9NR81 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms