Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.53■□□□□ 0.88
ZFYVE28Q9HCC9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 KRT8P47-201ENST00000604727 1398 ntBASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 PRSS29P-201ENST00000440800 595 ntBASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 AC108073.2-201ENST00000464002 357 ntBASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 SPCS2P1-201ENST00000561636 679 ntBASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.52■□□□□ 0.88
ZFYVE28Q9HCC9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
ZFYVE28Q9HCC9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.52■□□□□ 0.87
ZFYVE28Q9HCC9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ZFYVE28Q9HCC9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 AC096633.1-201ENST00000422446 749 ntBASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 AC006504.4-201ENST00000592118 1568 ntBASIC20.51■□□□□ 0.87
ZFYVE28Q9HCC9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 ELK2BP-201ENST00000415014 1224 ntBASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 AC103564.2-201ENST00000432853 1299 ntBASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 COX20P2-201ENST00000452636 358 ntBASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 AC073592.5-201ENST00000624854 528 ntBASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ZFYVE28Q9HCC9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms