Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRTM1Q9HBL6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 MMP23A-201ENST00000234610 1017 ntBASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 AL512604.3-201ENST00000569583 964 ntBASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRTM1Q9HBL6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 DUTP2-201ENST00000519164 463 ntBASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 FAM87A-204ENST00000613235 858 ntBASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LRTM1Q9HBL6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 AC132938.6-201ENST00000623828 1655 ntBASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 HMGA1P5-201ENST00000412453 271 ntBASIC17.36■□□□□ 0.37
LRTM1Q9HBL6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms