Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.98■□□□□ 0.95
EFCC1Q9HA90 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 AC005332.8-201ENST00000622750 2735 ntBASIC20.97■□□□□ 0.95
EFCC1Q9HA90 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 RNA5SP416-201ENST00000516838 111 ntBASIC20.97■□□□□ 0.95
EFCC1Q9HA90 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 KRT18P28-201ENST00000453838 1332 ntBASIC20.97■□□□□ 0.95
EFCC1Q9HA90 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
EFCC1Q9HA90 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 AP000974.1-201ENST00000623909 2387 ntBASIC20.96■□□□□ 0.95
EFCC1Q9HA90 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 AC004832.2-201ENST00000426397 482 ntBASIC20.96■□□□□ 0.95
EFCC1Q9HA90 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.96■□□□□ 0.95
EFCC1Q9HA90 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EFCC1Q9HA90 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EFCC1Q9HA90 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms