Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR1BQ9H9Y6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR1BQ9H9Y6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
POLR1BQ9H9Y6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLR1BQ9H9Y6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR1BQ9H9Y6 AL391807.1-203ENST00000604392 2365 ntBASIC17.89■□□□□ 0.45
POLR1BQ9H9Y6 AC139713.2-201ENST00000641328 2723 ntBASIC17.89■□□□□ 0.45
POLR1BQ9H9Y6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.89■□□□□ 0.45
POLR1BQ9H9Y6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLR1BQ9H9Y6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLR1BQ9H9Y6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR1BQ9H9Y6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR1BQ9H9Y6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 AC012615.1-201ENST00000565797 1299 ntBASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 MIR3917-201ENST00000580971 93 ntBASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 AC067852.2-201ENST00000590513 2313 ntBASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
POLR1BQ9H9Y6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 AL022342.1-201ENST00000400363 863 ntBASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 AC104692.2-201ENST00000603054 253 ntBASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.87■□□□□ 0.45
POLR1BQ9H9Y6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 AL031598.1-201ENST00000561511 1773 ntBASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.86■□□□□ 0.45
POLR1BQ9H9Y6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms