Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 AC098831.1-202ENST00000438821 336 ntBASIC17.12■□□□□ 0.33
STRADBQ9C0K7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 AC008735.5-201ENST00000623544 497 ntBASIC17.12■□□□□ 0.33
STRADBQ9C0K7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
STRADBQ9C0K7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 AC105339.3-201ENST00000560043 636 ntBASIC17.11■□□□□ 0.33
STRADBQ9C0K7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 MTDHP4-201ENST00000600287 670 ntBASIC17.11■□□□□ 0.33
STRADBQ9C0K7 Z83851.2-201ENST00000609564 659 ntBASIC17.11■□□□□ 0.33
STRADBQ9C0K7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
STRADBQ9C0K7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 AC140113.2-201ENST00000604370 208 ntBASIC17.1■□□□□ 0.33
STRADBQ9C0K7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 GMCL1P1-201ENST00000463439 1581 ntBASIC17.1■□□□□ 0.33
STRADBQ9C0K7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
STRADBQ9C0K7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 AC005332.7-201ENST00000614046 2005 ntBASIC17.09■□□□□ 0.33
STRADBQ9C0K7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 AL499627.1-201ENST00000569373 2188 ntBASIC17.09■□□□□ 0.33
STRADBQ9C0K7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 NKAPP1-205ENST00000585790 367 ntBASIC17.09■□□□□ 0.33
STRADBQ9C0K7 AL356488.2-201ENST00000602755 427 ntBASIC17.09■□□□□ 0.33
STRADBQ9C0K7 AC025062.2-201ENST00000605477 670 ntBASIC17.09■□□□□ 0.33
STRADBQ9C0K7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
STRADBQ9C0K7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms