Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.15■□□□□ 0.34
BBS4Q96RK4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.15■□□□□ 0.34
BBS4Q96RK4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.15■□□□□ 0.34
BBS4Q96RK4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.15■□□□□ 0.34
BBS4Q96RK4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.15■□□□□ 0.34
BBS4Q96RK4 AC012306.2-201ENST00000609350 630 ntBASIC17.15■□□□□ 0.34
BBS4Q96RK4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
BBS4Q96RK4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.15■□□□□ 0.34
BBS4Q96RK4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
BBS4Q96RK4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BBS4Q96RK4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
BBS4Q96RK4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.14■□□□□ 0.34
BBS4Q96RK4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BBS4Q96RK4 AC093010.1-201ENST00000473625 1624 ntBASIC17.14■□□□□ 0.33
BBS4Q96RK4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.14■□□□□ 0.33
BBS4Q96RK4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
BBS4Q96RK4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BBS4Q96RK4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BBS4Q96RK4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.14■□□□□ 0.33
BBS4Q96RK4 OR6D1P-203ENST00000641209 4860 ntBASIC17.14■□□□□ 0.33
BBS4Q96RK4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BBS4Q96RK4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
BBS4Q96RK4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.14■□□□□ 0.33
BBS4Q96RK4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BBS4Q96RK4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BBS4Q96RK4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
BBS4Q96RK4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.14■□□□□ 0.33
BBS4Q96RK4 AC211429.1-201ENST00000415277 523 ntBASIC17.14■□□□□ 0.33
BBS4Q96RK4 PVRIG2P-201ENST00000435460 978 ntBASIC17.14■□□□□ 0.33
BBS4Q96RK4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
BBS4Q96RK4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.14■□□□□ 0.33
BBS4Q96RK4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.14■□□□□ 0.33
BBS4Q96RK4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BBS4Q96RK4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BBS4Q96RK4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
BBS4Q96RK4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.14■□□□□ 0.33
BBS4Q96RK4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
BBS4Q96RK4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BBS4Q96RK4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BBS4Q96RK4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BBS4Q96RK4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BBS4Q96RK4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BBS4Q96RK4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BBS4Q96RK4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
BBS4Q96RK4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.13■□□□□ 0.33
BBS4Q96RK4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 TERF1P1-201ENST00000311003 1181 ntBASIC17.13■□□□□ 0.33
BBS4Q96RK4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 BX664615.1-201ENST00000443558 458 ntBASIC17.13■□□□□ 0.33
BBS4Q96RK4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.13■□□□□ 0.33
BBS4Q96RK4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.13■□□□□ 0.33
BBS4Q96RK4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BBS4Q96RK4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BBS4Q96RK4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
BBS4Q96RK4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.13■□□□□ 0.33
BBS4Q96RK4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
BBS4Q96RK4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.13■□□□□ 0.33
BBS4Q96RK4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BBS4Q96RK4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BBS4Q96RK4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.13■□□□□ 0.33
BBS4Q96RK4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.13■□□□□ 0.33
BBS4Q96RK4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BBS4Q96RK4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BBS4Q96RK4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
BBS4Q96RK4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.12■□□□□ 0.33
BBS4Q96RK4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BBS4Q96RK4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BBS4Q96RK4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BBS4Q96RK4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms