Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASD1Q96PB1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CASD1Q96PB1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CASD1Q96PB1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 AL591424.1-201ENST00000442569 1213 ntBASIC19.18■□□□□ 0.66
CASD1Q96PB1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CASD1Q96PB1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASD1Q96PB1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.18■□□□□ 0.66
CASD1Q96PB1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CASD1Q96PB1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASD1Q96PB1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASD1Q96PB1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASD1Q96PB1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.17■□□□□ 0.66
CASD1Q96PB1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CASD1Q96PB1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASD1Q96PB1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CASD1Q96PB1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASD1Q96PB1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CASD1Q96PB1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.17■□□□□ 0.66
CASD1Q96PB1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CASD1Q96PB1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CASD1Q96PB1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
CASD1Q96PB1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CASD1Q96PB1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CASD1Q96PB1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.17■□□□□ 0.66
CASD1Q96PB1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CASD1Q96PB1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.17■□□□□ 0.66
CASD1Q96PB1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.17■□□□□ 0.66
CASD1Q96PB1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.17■□□□□ 0.66
CASD1Q96PB1 AL022326.1-202ENST00000641533 845 ntBASIC19.17■□□□□ 0.66
CASD1Q96PB1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.17■□□□□ 0.66
CASD1Q96PB1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.17■□□□□ 0.66
CASD1Q96PB1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASD1Q96PB1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CASD1Q96PB1 CROCCP3-202ENST00000420820 1947 ntBASIC19.17■□□□□ 0.66
CASD1Q96PB1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CASD1Q96PB1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.17■□□□□ 0.66
CASD1Q96PB1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CASD1Q96PB1 AC004817.3-201ENST00000602957 2129 ntBASIC19.16■□□□□ 0.66
CASD1Q96PB1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.16■□□□□ 0.66
CASD1Q96PB1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CASD1Q96PB1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASD1Q96PB1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CASD1Q96PB1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASD1Q96PB1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CASD1Q96PB1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.16■□□□□ 0.66
CASD1Q96PB1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASD1Q96PB1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASD1Q96PB1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CASD1Q96PB1 KRT18P3-201ENST00000451602 1288 ntBASIC19.16■□□□□ 0.66
CASD1Q96PB1 DUTP2-201ENST00000519164 463 ntBASIC19.16■□□□□ 0.66
CASD1Q96PB1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.16■□□□□ 0.66
CASD1Q96PB1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.16■□□□□ 0.66
CASD1Q96PB1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASD1Q96PB1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.16■□□□□ 0.66
CASD1Q96PB1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASD1Q96PB1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.16■□□□□ 0.66
CASD1Q96PB1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.16■□□□□ 0.66
CASD1Q96PB1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CASD1Q96PB1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CASD1Q96PB1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASD1Q96PB1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASD1Q96PB1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASD1Q96PB1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CASD1Q96PB1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASD1Q96PB1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASD1Q96PB1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.16■□□□□ 0.66
CASD1Q96PB1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASD1Q96PB1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASD1Q96PB1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CASD1Q96PB1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CASD1Q96PB1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASD1Q96PB1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASD1Q96PB1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CASD1Q96PB1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CASD1Q96PB1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASD1Q96PB1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASD1Q96PB1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASD1Q96PB1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.15■□□□□ 0.66
CASD1Q96PB1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.15■□□□□ 0.66
CASD1Q96PB1 AC005104.2-201ENST00000427818 678 ntBASIC19.15■□□□□ 0.66
CASD1Q96PB1 PRYP5-201ENST00000451909 266 ntBASIC19.15■□□□□ 0.66
CASD1Q96PB1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASD1Q96PB1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.15■□□□□ 0.66
CASD1Q96PB1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.15■□□□□ 0.66
CASD1Q96PB1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CASD1Q96PB1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASD1Q96PB1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASD1Q96PB1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASD1Q96PB1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms