Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC17Q96LX7 MED22-202ENST00000371999 987 ntTSL 3 BASIC21■□□□□ 0.95
CCDC17Q96LX7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC17Q96LX7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21■□□□□ 0.95
CCDC17Q96LX7 SCARNA2-201ENST00000458748 420 ntBASIC21■□□□□ 0.95
CCDC17Q96LX7 AF186996.4-201ENST00000467186 377 ntBASIC21■□□□□ 0.95
CCDC17Q96LX7 MOK-208ENST00000519058 917 ntTSL 2 BASIC21■□□□□ 0.95
CCDC17Q96LX7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21■□□□□ 0.95
CCDC17Q96LX7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCDC17Q96LX7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21■□□□□ 0.95
CCDC17Q96LX7 AL773604.1-201ENST00000617417 272 ntBASIC21■□□□□ 0.95
CCDC17Q96LX7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21■□□□□ 0.95
CCDC17Q96LX7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC17Q96LX7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC17Q96LX7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC17Q96LX7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21■□□□□ 0.95
CCDC17Q96LX7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC17Q96LX7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CCDC17Q96LX7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC17Q96LX7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21■□□□□ 0.95
CCDC17Q96LX7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 KRT8P47-201ENST00000604727 1398 ntBASIC20.99■□□□□ 0.95
CCDC17Q96LX7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.99■□□□□ 0.95
CCDC17Q96LX7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 RNA5SP419-201ENST00000515908 135 ntBASIC20.99■□□□□ 0.95
CCDC17Q96LX7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC17Q96LX7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 AC122714.2-201ENST00000502787 707 ntBASIC20.98■□□□□ 0.95
CCDC17Q96LX7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 AP001005.1-201ENST00000571755 1248 ntBASIC20.98■□□□□ 0.95
CCDC17Q96LX7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC17Q96LX7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
CCDC17Q96LX7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC17Q96LX7 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC17Q96LX7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC17Q96LX7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC17Q96LX7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC17Q96LX7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC17Q96LX7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC17Q96LX7 AC018712.1-201ENST00000455767 687 ntBASIC20.97■□□□□ 0.95
CCDC17Q96LX7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC17Q96LX7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC17Q96LX7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CCDC17Q96LX7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC17Q96LX7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC17Q96LX7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms