Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH3Q96II8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH3Q96II8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
LRCH3Q96II8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH3Q96II8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH3Q96II8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH3Q96II8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 MIR6752-201ENST00000618442 71 ntBASIC19.47■□□□□ 0.71
LRCH3Q96II8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH3Q96II8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH3Q96II8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH3Q96II8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH3Q96II8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH3Q96II8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH3Q96II8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH3Q96II8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH3Q96II8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH3Q96II8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH3Q96II8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH3Q96II8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH3Q96II8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH3Q96II8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH3Q96II8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
LRCH3Q96II8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH3Q96II8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH3Q96II8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 AL691432.2-201ENST00000607222 2038 ntBASIC19.46■□□□□ 0.71
LRCH3Q96II8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH3Q96II8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH3Q96II8 AC125634.1-201ENST00000438758 1403 ntBASIC19.46■□□□□ 0.71
LRCH3Q96II8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH3Q96II8 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH3Q96II8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 INGX-202ENST00000489074 768 ntBASIC19.46■□□□□ 0.71
LRCH3Q96II8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH3Q96II8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH3Q96II8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH3Q96II8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH3Q96II8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH3Q96II8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH3Q96II8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH3Q96II8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH3Q96II8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.46■□□□□ 0.71
LRCH3Q96II8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH3Q96II8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.45■□□□□ 0.7
LRCH3Q96II8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.45■□□□□ 0.7
LRCH3Q96II8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 MIR661-201ENST00000384842 89 ntBASIC19.45■□□□□ 0.7
LRCH3Q96II8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LRCH3Q96II8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.45■□□□□ 0.7
LRCH3Q96II8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.45■□□□□ 0.7
LRCH3Q96II8 FAM86GP-201ENST00000448322 971 ntBASIC19.45■□□□□ 0.7
LRCH3Q96II8 AC136632.2-201ENST00000512891 861 ntBASIC19.45■□□□□ 0.7
LRCH3Q96II8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH3Q96II8 RN7SL204P-201ENST00000582831 262 ntBASIC19.45■□□□□ 0.7
LRCH3Q96II8 AC004835.2-201ENST00000603762 682 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms