Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 AC011676.5-201ENST00000624864 2660 ntBASIC17.2■□□□□ 0.34
LRRC58Q96CX6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 AL024508.2-201ENST00000607749 1894 ntBASIC17.19■□□□□ 0.34
LRRC58Q96CX6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 KRT18P23-201ENST00000435622 1283 ntBASIC17.19■□□□□ 0.34
LRRC58Q96CX6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 DUTP2-201ENST00000519164 463 ntBASIC17.19■□□□□ 0.34
LRRC58Q96CX6 KRT18P6-201ENST00000555540 1265 ntBASIC17.19■□□□□ 0.34
LRRC58Q96CX6 DGCR10-201ENST00000609839 495 ntBASIC17.19■□□□□ 0.34
LRRC58Q96CX6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC58Q96CX6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 TSPY20P-201ENST00000450910 630 ntBASIC17.18■□□□□ 0.34
LRRC58Q96CX6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 CROCCP2-202ENST00000412962 2773 ntBASIC17.18■□□□□ 0.34
LRRC58Q96CX6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC58Q96CX6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC58Q96CX6 FAM197Y1-201ENST00000421178 764 ntBASIC17.17■□□□□ 0.34
LRRC58Q96CX6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms