Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 AL592071.1-201ENST00000611956 408 ntBASIC20.48■□□□□ 0.87
TNFRSF25Q93038 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 AC009949.1-201ENST00000623048 1830 ntBASIC20.48■□□□□ 0.87
TNFRSF25Q93038 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNFRSF25Q93038 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 AL358472.4-201ENST00000633140 710 ntBASIC20.47■□□□□ 0.87
TNFRSF25Q93038 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 GNAS-203ENST00000306120 1878 ntBASIC20.47■□□□□ 0.87
TNFRSF25Q93038 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNFRSF25Q93038 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 AC005332.8-201ENST00000622750 2735 ntBASIC20.46■□□□□ 0.87
TNFRSF25Q93038 IER3-202ENST00000376377 1350 ntBASIC20.46■□□□□ 0.87
TNFRSF25Q93038 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF25Q93038 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
TNFRSF25Q93038 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms