Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 ABCD1P5-201ENST00000445663 754 ntBASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 AL773604.1-201ENST00000617417 272 ntBASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 AC135776.1-201ENST00000319817 2481 ntBASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
SH3RF3Q8TEJ3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 AP001005.1-201ENST00000571755 1248 ntBASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 AC010460.3-201ENST00000511359 1579 ntBASIC21.36■■□□□ 1.01
SH3RF3Q8TEJ3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 AL031284.1-201ENST00000419297 478 ntBASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 AC018712.1-201ENST00000455767 687 ntBASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 AF186996.4-201ENST00000467186 377 ntBASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 RNPS1P1-201ENST00000507437 918 ntBASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 AC064862.7-201ENST00000604520 867 ntBASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF3Q8TEJ3 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.34■■□□□ 1.01
SH3RF3Q8TEJ3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.34■■□□□ 1.01
SH3RF3Q8TEJ3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3RF3Q8TEJ3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SH3RF3Q8TEJ3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3RF3Q8TEJ3 AC097374.2-201ENST00000618617 1306 ntBASIC21.34■■□□□ 1.01
SH3RF3Q8TEJ3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.34■■□□□ 1.01
SH3RF3Q8TEJ3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.34■■□□□ 1.01
SH3RF3Q8TEJ3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3RF3Q8TEJ3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.34■■□□□ 1.01
SH3RF3Q8TEJ3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3RF3Q8TEJ3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3RF3Q8TEJ3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3RF3Q8TEJ3 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms