Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 KRT18P55-202ENST00000578578 1546 ntBASIC18.21■□□□□ 0.51
CHD5Q8TDI0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 LINC00304-203ENST00000565008 1864 ntBASIC18.21■□□□□ 0.51
CHD5Q8TDI0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CHD5Q8TDI0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.21■□□□□ 0.5
CHD5Q8TDI0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.21■□□□□ 0.5
CHD5Q8TDI0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CHD5Q8TDI0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CHD5Q8TDI0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CHD5Q8TDI0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.21■□□□□ 0.5
CHD5Q8TDI0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 KLF4P1-201ENST00000412782 1185 ntBASIC18.2■□□□□ 0.5
CHD5Q8TDI0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD5Q8TDI0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 BX276092.7-203ENST00000637198 1536 ntBASIC18.19■□□□□ 0.5
CHD5Q8TDI0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 TSPY19P-201ENST00000418461 509 ntBASIC18.19■□□□□ 0.5
CHD5Q8TDI0 TSPY18P-201ENST00000441642 509 ntBASIC18.19■□□□□ 0.5
CHD5Q8TDI0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHD5Q8TDI0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 INTS4P1-201ENST00000438455 1935 ntBASIC18.18■□□□□ 0.5
CHD5Q8TDI0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 AC096582.2-201ENST00000510860 516 ntBASIC18.18■□□□□ 0.5
CHD5Q8TDI0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHD5Q8TDI0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms