Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMARCC2Q8TAQ2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMARCC2Q8TAQ2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMARCC2Q8TAQ2 AL391807.1-203ENST00000604392 2365 ntBASIC21.16■□□□□ 0.98
SMARCC2Q8TAQ2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMARCC2Q8TAQ2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMARCC2Q8TAQ2 LINC00896-202ENST00000609602 2128 ntBASIC21.16■□□□□ 0.98
SMARCC2Q8TAQ2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMARCC2Q8TAQ2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SMARCC2Q8TAQ2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMARCC2Q8TAQ2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 SPDYE13P-201ENST00000445314 798 ntBASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 DUTP2-201ENST00000519164 463 ntBASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMARCC2Q8TAQ2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.14■□□□□ 0.98
SMARCC2Q8TAQ2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SMARCC2Q8TAQ2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMARCC2Q8TAQ2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.14■□□□□ 0.98
SMARCC2Q8TAQ2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMARCC2Q8TAQ2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMARCC2Q8TAQ2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SMARCC2Q8TAQ2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCC2Q8TAQ2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.14■□□□□ 0.97
SMARCC2Q8TAQ2 PVRIG2P-201ENST00000435460 978 ntBASIC21.14■□□□□ 0.97
SMARCC2Q8TAQ2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCC2Q8TAQ2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCC2Q8TAQ2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.14■□□□□ 0.97
SMARCC2Q8TAQ2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.14■□□□□ 0.97
SMARCC2Q8TAQ2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.14■□□□□ 0.97
SMARCC2Q8TAQ2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCC2Q8TAQ2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCC2Q8TAQ2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCC2Q8TAQ2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCC2Q8TAQ2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCC2Q8TAQ2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMARCC2Q8TAQ2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.13■□□□□ 0.97
SMARCC2Q8TAQ2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.12■□□□□ 0.97
SMARCC2Q8TAQ2 AL645929.1-201ENST00000420084 975 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms