Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 AC006116.8-202ENST00000587620 1550 ntBASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 GNAS-203ENST00000306120 1878 ntBASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 HOMER2P1-201ENST00000455653 964 ntBASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 AL359075.1-203ENST00000462729 1002 ntBASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 HYMAI.1-201ENST00000620949 238 ntBASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
PCDH19Q8TAB3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH19Q8TAB3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH19Q8TAB3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH19Q8TAB3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH19Q8TAB3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH19Q8TAB3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH19Q8TAB3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.64■□□□□ 0.58
PCDH19Q8TAB3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH19Q8TAB3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 HBZP1-201ENST00000354915 429 ntBASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDH19Q8TAB3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms