Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 MIR564-202ENST00000385049 94 ntBASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 AC012618.2-201ENST00000428058 849 ntBASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 AC142381.4-202ENST00000563973 229 ntBASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 TNRC18P3-201ENST00000441896 2691 ntBASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DNAAF1Q8NEP3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 AC084018.2-201ENST00000613093 2607 ntBASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 MFAP1P1-201ENST00000442257 1255 ntBASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 TSPY20P-201ENST00000450910 630 ntBASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 AC008622.2-201ENST00000617006 1229 ntBASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.91■□□□□ 0.14
DNAAF1Q8NEP3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
DNAAF1Q8NEP3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms