Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AL671277.2-201ENST00000458060 996 ntBASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 AP003733.1-201ENST00000491725 852 ntBASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 HYMAI.1-201ENST00000620949 238 ntBASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 AL590326.2-201ENST00000625139 305 ntBASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.24■□□□□ 0.35
SRFBP1Q8NEF9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SRFBP1Q8NEF9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SRFBP1Q8NEF9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms