Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TTC39CQ8N584 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
TTC39CQ8N584 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 AC246785.2-201ENST00000432512 513 ntBASIC19.18■□□□□ 0.66
TTC39CQ8N584 VENTXP7-201ENST00000475503 772 ntBASIC19.18■□□□□ 0.66
TTC39CQ8N584 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TTC39CQ8N584 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.18■□□□□ 0.66
TTC39CQ8N584 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
TTC39CQ8N584 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.18■□□□□ 0.66
TTC39CQ8N584 AL353801.3-201ENST00000609898 542 ntBASIC19.18■□□□□ 0.66
TTC39CQ8N584 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.18■□□□□ 0.66
TTC39CQ8N584 AC090340.1-201ENST00000620778 4980 ntBASIC19.18■□□□□ 0.66
TTC39CQ8N584 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.18■□□□□ 0.66
TTC39CQ8N584 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.18■□□□□ 0.66
TTC39CQ8N584 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.18■□□□□ 0.66
TTC39CQ8N584 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TTC39CQ8N584 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC39CQ8N584 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TTC39CQ8N584 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
TTC39CQ8N584 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.17■□□□□ 0.66
TTC39CQ8N584 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39CQ8N584 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.17■□□□□ 0.66
TTC39CQ8N584 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.17■□□□□ 0.66
TTC39CQ8N584 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TTC39CQ8N584 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39CQ8N584 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39CQ8N584 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39CQ8N584 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39CQ8N584 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39CQ8N584 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39CQ8N584 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39CQ8N584 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.17■□□□□ 0.66
TTC39CQ8N584 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.17■□□□□ 0.66
TTC39CQ8N584 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TTC39CQ8N584 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TTC39CQ8N584 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.17■□□□□ 0.66
TTC39CQ8N584 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
TTC39CQ8N584 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39CQ8N584 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39CQ8N584 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39CQ8N584 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39CQ8N584 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TTC39CQ8N584 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39CQ8N584 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.17■□□□□ 0.66
TTC39CQ8N584 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC39CQ8N584 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.17■□□□□ 0.66
TTC39CQ8N584 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39CQ8N584 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.16■□□□□ 0.66
TTC39CQ8N584 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.16■□□□□ 0.66
TTC39CQ8N584 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39CQ8N584 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39CQ8N584 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.16■□□□□ 0.66
TTC39CQ8N584 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39CQ8N584 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39CQ8N584 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39CQ8N584 AC124864.1-201ENST00000623408 392 ntBASIC19.16■□□□□ 0.66
TTC39CQ8N584 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39CQ8N584 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39CQ8N584 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TTC39CQ8N584 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39CQ8N584 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39CQ8N584 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39CQ8N584 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.16■□□□□ 0.66
TTC39CQ8N584 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39CQ8N584 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39CQ8N584 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.16■□□□□ 0.66
TTC39CQ8N584 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39CQ8N584 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39CQ8N584 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC39CQ8N584 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.16■□□□□ 0.66
TTC39CQ8N584 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC39CQ8N584 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC39CQ8N584 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.15■□□□□ 0.66
TTC39CQ8N584 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TTC39CQ8N584 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.15■□□□□ 0.66
TTC39CQ8N584 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC39CQ8N584 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC39CQ8N584 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.15■□□□□ 0.66
TTC39CQ8N584 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TTC39CQ8N584 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC39CQ8N584 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TTC39CQ8N584 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.15■□□□□ 0.66
TTC39CQ8N584 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC39CQ8N584 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms