Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 KRT18P65-201ENST00000439811 1286 ntBASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 OR7E14P-202ENST00000530490 1290 ntBASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 AL139288.1-201ENST00000623748 933 ntBASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 MYLKP1-201ENST00000509077 1580 ntBASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 AC104109.2-201ENST00000602919 1418 ntBASIC18.32■□□□□ 0.52
SYNPOQ8N3V7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 SART3-203ENST00000546611 1184 ntBASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.31■□□□□ 0.52
SYNPOQ8N3V7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 MED15P5-201ENST00000423150 992 ntBASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 RPS2P1-201ENST00000434010 821 ntBASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNPOQ8N3V7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNPOQ8N3V7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYNPOQ8N3V7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms