Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 PKD1P1-201ENST00000458669 6805 ntBASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 LINC00167-201ENST00000530583 1419 ntBASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 AC132938.6-201ENST00000623828 1655 ntBASIC16.53■□□□□ 0.24
ZNF440Q8IYI8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 RNF152P1-201ENST00000397754 604 ntBASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 HLA-F-220ENST00000434407 884 ntBASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 KRT18P48-201ENST00000434763 852 ntBASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.52■□□□□ 0.24
ZNF440Q8IYI8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF440Q8IYI8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF440Q8IYI8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF440Q8IYI8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
ZNF440Q8IYI8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF440Q8IYI8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF440Q8IYI8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
ZNF440Q8IYI8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF440Q8IYI8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
ZNF440Q8IYI8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 TSPY5P-201ENST00000426936 936 ntBASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 AC117947.1-201ENST00000427448 529 ntBASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 KRT18P65-201ENST00000439811 1286 ntBASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 AC116407.2-201ENST00000613639 860 ntBASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF440Q8IYI8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms