Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 KRT18P56-201ENST00000507275 550 ntBASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 AC016734.2-201ENST00000624325 1377 ntBASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 TSPY12P-201ENST00000421279 868 ntBASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 KRT8P26-201ENST00000534154 1276 ntBASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SCUBE3Q8IX30 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 BX276092.5-203ENST00000456199 560 ntBASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.97■□□□□ 0.63
SCUBE3Q8IX30 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SCUBE3Q8IX30 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms