Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.58■□□□□ 0.56
CDKL3Q8IVW4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.58■□□□□ 0.56
CDKL3Q8IVW4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.58■□□□□ 0.56
CDKL3Q8IVW4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.58■□□□□ 0.56
CDKL3Q8IVW4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.58■□□□□ 0.56
CDKL3Q8IVW4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CDKL3Q8IVW4 AC006116.8-202ENST00000587620 1550 ntBASIC18.58■□□□□ 0.56
CDKL3Q8IVW4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDKL3Q8IVW4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.58■□□□□ 0.56
CDKL3Q8IVW4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.58■□□□□ 0.56
CDKL3Q8IVW4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.58■□□□□ 0.56
CDKL3Q8IVW4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDKL3Q8IVW4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDKL3Q8IVW4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CDKL3Q8IVW4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.58■□□□□ 0.56
CDKL3Q8IVW4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 LIN28AP1-201ENST00000429574 405 ntBASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 LINC00896-202ENST00000609602 2128 ntBASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 AL023973.1-201ENST00000624619 620 ntBASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CDKL3Q8IVW4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 AC022898.2-201ENST00000616822 1312 ntBASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 ATP5G1P1-201ENST00000448724 379 ntBASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 LINC00167-201ENST00000530583 1419 ntBASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 AC012317.2-201ENST00000623305 2251 ntBASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDKL3Q8IVW4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CDKL3Q8IVW4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms