Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VRK2Q86Y07 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VRK2Q86Y07 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.72■□□□□ 0.27
VRK2Q86Y07 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
VRK2Q86Y07 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.72■□□□□ 0.27
VRK2Q86Y07 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VRK2Q86Y07 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.72■□□□□ 0.27
VRK2Q86Y07 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VRK2Q86Y07 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
VRK2Q86Y07 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VRK2Q86Y07 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.72■□□□□ 0.27
VRK2Q86Y07 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VRK2Q86Y07 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.72■□□□□ 0.27
VRK2Q86Y07 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.72■□□□□ 0.27
VRK2Q86Y07 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.72■□□□□ 0.27
VRK2Q86Y07 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VRK2Q86Y07 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VRK2Q86Y07 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VRK2Q86Y07 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK2Q86Y07 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VRK2Q86Y07 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK2Q86Y07 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.71■□□□□ 0.27
VRK2Q86Y07 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
VRK2Q86Y07 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK2Q86Y07 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK2Q86Y07 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
VRK2Q86Y07 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK2Q86Y07 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK2Q86Y07 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK2Q86Y07 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.71■□□□□ 0.27
VRK2Q86Y07 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VRK2Q86Y07 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.71■□□□□ 0.27
VRK2Q86Y07 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.71■□□□□ 0.27
VRK2Q86Y07 GCSHP2-201ENST00000560971 527 ntBASIC16.71■□□□□ 0.27
VRK2Q86Y07 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.71■□□□□ 0.27
VRK2Q86Y07 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
VRK2Q86Y07 AC145285.6-201ENST00000604632 637 ntBASIC16.71■□□□□ 0.27
VRK2Q86Y07 AL138966.2-201ENST00000621997 464 ntBASIC16.71■□□□□ 0.27
VRK2Q86Y07 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK2Q86Y07 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.71■□□□□ 0.27
VRK2Q86Y07 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VRK2Q86Y07 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VRK2Q86Y07 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.71■□□□□ 0.27
VRK2Q86Y07 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
VRK2Q86Y07 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
VRK2Q86Y07 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
VRK2Q86Y07 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
VRK2Q86Y07 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 AP000523.1-201ENST00000398242 1049 ntBASIC16.7■□□□□ 0.26
VRK2Q86Y07 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.7■□□□□ 0.26
VRK2Q86Y07 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
VRK2Q86Y07 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.7■□□□□ 0.26
VRK2Q86Y07 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.7■□□□□ 0.26
VRK2Q86Y07 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.7■□□□□ 0.26
VRK2Q86Y07 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
VRK2Q86Y07 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
VRK2Q86Y07 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.7■□□□□ 0.26
VRK2Q86Y07 AL023973.1-201ENST00000624619 620 ntBASIC16.7■□□□□ 0.26
VRK2Q86Y07 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
VRK2Q86Y07 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.7■□□□□ 0.26
VRK2Q86Y07 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
VRK2Q86Y07 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.7■□□□□ 0.26
VRK2Q86Y07 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VRK2Q86Y07 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VRK2Q86Y07 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VRK2Q86Y07 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VRK2Q86Y07 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms