Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 AC022898.2-201ENST00000616822 1312 ntBASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 AC112698.1-201ENST00000510299 916 ntBASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 DUTP2-201ENST00000519164 463 ntBASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 PRELID1P1-202ENST00000567272 903 ntBASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
LRRTM4Q86VH4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 AC091607.1-201ENST00000490318 1060 ntBASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRTM4Q86VH4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRTM4Q86VH4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms