Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SCXQ7RTU7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SCXQ7RTU7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SCXQ7RTU7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
SCXQ7RTU7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SCXQ7RTU7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SCXQ7RTU7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
SCXQ7RTU7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SCXQ7RTU7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SCXQ7RTU7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SCXQ7RTU7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SCXQ7RTU7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SCXQ7RTU7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SCXQ7RTU7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SCXQ7RTU7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SCXQ7RTU7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SCXQ7RTU7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SCXQ7RTU7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SCXQ7RTU7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.96□□□□□ -0.49
SCXQ7RTU7 AC069148.1-201ENST00000608741 768 ntBASIC11.96□□□□□ -0.49
SCXQ7RTU7 AC083849.1-201ENST00000615227 514 ntBASIC11.96□□□□□ -0.49
SCXQ7RTU7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SCXQ7RTU7 GPAT2P1-201ENST00000444924 1672 ntBASIC11.96□□□□□ -0.5
SCXQ7RTU7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
SCXQ7RTU7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.96□□□□□ -0.5
SCXQ7RTU7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SCXQ7RTU7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
SCXQ7RTU7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC11.96□□□□□ -0.5
SCXQ7RTU7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
SCXQ7RTU7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
SCXQ7RTU7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
SCXQ7RTU7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SCXQ7RTU7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC11.96□□□□□ -0.5
SCXQ7RTU7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SCXQ7RTU7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
SCXQ7RTU7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 LINC01311-201ENST00000565162 1445 ntBASIC11.95□□□□□ -0.5
SCXQ7RTU7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC11.95□□□□□ -0.5
SCXQ7RTU7 AC135050.7-201ENST00000624508 2218 ntBASIC11.95□□□□□ -0.5
SCXQ7RTU7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
SCXQ7RTU7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC11.95□□□□□ -0.5
SCXQ7RTU7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC11.95□□□□□ -0.5
SCXQ7RTU7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC11.95□□□□□ -0.5
SCXQ7RTU7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC11.95□□□□□ -0.5
SCXQ7RTU7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC11.95□□□□□ -0.5
SCXQ7RTU7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC11.95□□□□□ -0.5
SCXQ7RTU7 ZNF444P1-201ENST00000559497 298 ntBASIC11.95□□□□□ -0.5
SCXQ7RTU7 AL136038.3-201ENST00000561909 1096 ntBASIC11.95□□□□□ -0.5
SCXQ7RTU7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SCXQ7RTU7 FGF14-AS2-201ENST00000606448 1074 ntBASIC11.95□□□□□ -0.5
SCXQ7RTU7 AC116407.4-201ENST00000623319 1061 ntBASIC11.95□□□□□ -0.5
SCXQ7RTU7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC11.95□□□□□ -0.5
SCXQ7RTU7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 AC036111.1-201ENST00000533973 1582 ntBASIC11.95□□□□□ -0.5
SCXQ7RTU7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC11.95□□□□□ -0.5
SCXQ7RTU7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCXQ7RTU7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
SCXQ7RTU7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms