Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRFN4Q6PJG9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRFN4Q6PJG9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 AC010203.1-204ENST00000548782 407 ntBASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRFN4Q6PJG9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 MIR149-201ENST00000384879 89 ntBASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 MIR3180-4-201ENST00000582223 153 ntBASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 AC009102.3-201ENST00000623118 1491 ntBASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRFN4Q6PJG9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 AC093677.2-201ENST00000600169 1863 ntBASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 AC010240.3-201ENST00000607688 395 ntBASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 AC005363.2-201ENST00000618631 242 ntBASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LRFN4Q6PJG9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRFN4Q6PJG9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRFN4Q6PJG9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms