Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.46■□□□□ 0.23
NIPAL3Q6P499 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 KRT8P7-201ENST00000533003 1432 ntBASIC16.46■□□□□ 0.23
NIPAL3Q6P499 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 AP000523.1-201ENST00000398242 1049 ntBASIC16.46■□□□□ 0.23
NIPAL3Q6P499 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 KRT18P57-201ENST00000443599 1254 ntBASIC16.46■□□□□ 0.23
NIPAL3Q6P499 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 NEK4P2-201ENST00000580004 1012 ntBASIC16.46■□□□□ 0.23
NIPAL3Q6P499 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.46■□□□□ 0.23
NIPAL3Q6P499 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 AL138966.2-201ENST00000621997 464 ntBASIC16.46■□□□□ 0.23
NIPAL3Q6P499 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NIPAL3Q6P499 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
NIPAL3Q6P499 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 HOXB1-202ENST00000577092 1414 ntBASIC16.45■□□□□ 0.22
NIPAL3Q6P499 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 AC024243.1-201ENST00000609234 778 ntBASIC16.45■□□□□ 0.22
NIPAL3Q6P499 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.45■□□□□ 0.22
NIPAL3Q6P499 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.45■□□□□ 0.22
NIPAL3Q6P499 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 AC140113.3-201ENST00000605663 199 ntBASIC16.44■□□□□ 0.22
NIPAL3Q6P499 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.44■□□□□ 0.22
NIPAL3Q6P499 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms