Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 AKR1C7P-201ENST00000305623 895 ntBASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 AC079781.3-201ENST00000449110 356 ntBASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 AL031008.1-201ENST00000619963 541 ntBASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SWSAP1Q6NVH7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 AC132008.2-207ENST00000454517 770 ntBASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 DUTP2-201ENST00000519164 463 ntBASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 AC104692.2-201ENST00000603054 253 ntBASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 AC009113.1-201ENST00000570267 2443 ntBASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.04■□□□□ 0.8
SWSAP1Q6NVH7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SWSAP1Q6NVH7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms